Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947063.1_cds_XP_016488942.1_79517
CDS Infomation

[gene=LOC107808892] [db_xref=GeneID:107808892] [protein=CO(2)-response secreted protease-like isoform X2] [protein_id=XP_016488942.1] [location=complement(join(35193..35752,36079..36262,36370..36484,37211..37456,37558..37661,38252..38768,39020..39131,39236..39495,42475..42662))] [gbkey=CDS]
Sequence

ATGAAAGGAATATCTTTGTTTTTCTCTTTTTCTCTTTTCGTGATTGTCTCTTGTATAAGA
GAAGAAGCCGAGTCAGCTTCTCAAGCAAAAAACGATGACATTTATATCGTTTATATGGGT
GCTGCTGCTTCATCTAATGGCGGCACCAGAAATGATCAAATGCAGCTTGTGAGCTCATTG
ATTAAAAGAAACAAGAATACAGTGGTACACAGCTACAAGAATGGTTTCTCAGGATTTGCG
GCACGTTTATCAGAAGCTGAAGCCCAATCTATCGCTCAAAGACCTGGTGTTGTCTCTGTT
TTCCCTGATCCAGTGCTGCAACTCCACACTACACGTTCATGGGATTTCTTGAAGTATCAA
ACCGTTGACGAAACCAATTCAAGTCCAAGCTCTGGTTCTGATTCATCACCAAATGGAGCT
GACACCATAATAGGAATCTTGGATACAGGAATATGGCCAGAATCAAAGAGTTTCAATGAC
AAGGGTATGGGTCCAATTCCAGCCCGGTGGAAAGGAACTTGCATGGATGGTCATGATTTT
GGCGCTTCCAAATGCAACAAGAAGATAGTTGGTGCAAGATTTTACGAGGAGTTTGATGGC
AGAGGAACGAAAATGGCTGGATCAGCCAGGGACGAGAATGGACATGGTACTCACGTTGCA
TCCACAGCAGCTGGGAGCCCTGTTGCAGGTGCATCCTACTATGGTCTAGCTGCAGGAACT
GCCAAGGGAGGATCTCCAGGTTCAAGAATCGCTGTGTATCGTGTCTGCACGTCTAATGGA
TGCCGTGGATCAGCTATCATGAAAGCATTTGATGATGCAATTGCAGATGGGGTTGATGTT
TTATCTCTATCACTTGGTTCATCACCTGGGTTCGAAGAGTTATCAAAAAATCCTATTGCC
ATAGGAGCATTTCATGCCGTGGAAAAGGGCATTGTTGTTGTCTGTTCTGCTGGAAATAGT
GGCCCTGATCCCAAAACTGTTGTCAATACAGCTCCTTGGATTCTCACTGTTGCAGCTACC
ACCATTGACCGTGACTTCGAGACAGATATTATCTTAGGTGGAAACAAGCTGGTTAAGGGT
GGAGGTATAAACTTTGGAAATATGACAAAATCTGCGGTCTACCCATTGATTCAAGGCTAT
TCAGCTAAACTAAACAAGCGTATTACTGAGGAAGAGGCAAGGGGTTGCGTTCCTGATTCA
TTAGACAAAAACAAAGTCAAGGGGAAAATTGTTGTATGTGAAAACCTTCAAAATGATGGA
TTTTCACCCAGTGACAGACTACTCGAAGTGAAGAGCCGAGGTGGAGTTGGATTTATACTA
ATAGATGATGATCTAAGAACAGTGGCACCCAAATTCGAATCGTTCCCAGCAGCTGCAGTC
TCTAGAAAAGATGGTACTGAAATCATCTCCTACATCAAATCCACAAGGAATCCAGTTGCA
TCAATTCTACCAACTGTTTCCACAACTAAGTATAAACCAGCTCCTGTTGTGCCTTACTTC
TCATCAAGGGGCCCTGCAGGAAACACCCCTAACCTCCTCAAACCAGATATTACAGCACCA
GGGGTAACAATTCTTGCTGCTTGGCCTGGAAATAAACAACCAATGTTCAACATACTCTCA
GGTACTTCCATGTCCTGCCCTCACGTTTCCGGCATTGCTGCAACTGTCAAGGCGCAAAAT
CCCACCTGGGGTCCCTCCACTATCAAATCAGCTATTATGACCACTGCTATTCAGACAAAC
AATTTGAAGGCTCCAATCACTACAAACTTTGGATCCAAGGCAACACCATATGACATAGGT
GCAGGAGAAGCAAGCACTTCAGGTCCATTAAAACCAGGTCTAGTCTACGCGACAGATGTC
GCCGACTACTTGCATTTCCTCTGTTCTGTTGGCTATGACATATCAAAGATAAAGCTGATC
TCAAGTACAGTTCCTAAAGACTTTTCATGCCCAAAACATTCAAGCTCTGAATTGGTTTCT
AATATGAATTACCCATCAATTGCTATTTCTGGTCTCAAAAAGTATAAAACCAAGAAAGTT
ACTAGAACTGTTACTAATGTTGGAGAAGAAGCATCGGTATATATTGCGATTGTTGAGGCA
CCAACTGGATTGCGAGTCCAAGTGATTCCAAGTAAACTGGAATTTACAAATAAAAACAAG
AAATTAAGCTATGAAGTGTCTTTTAGAGCTTCATCTACTACAAAGGAAGACATGTTTGGC
TCAATTACTTGGACAAATGGTAAGTACAAAGTCCGAAGCCCATTTGTTGTAAGTAACAGT
GGCTAG

Peptide Sequence

PEP ID

XP_016488942.1
PEP Infomation

PREDICTED: CO(2)-response secreted protease-like isoform X2 [Nicotiana tabacum]
Sequence

MKGISLFFSFSLFVIVSCIREEAESASQAKNDDIYIVYMGAAASSNGGTRNDQMQLVSSL
IKRNKNTVVHSYKNGFSGFAARLSEAEAQSIAQRPGVVSVFPDPVLQLHTTRSWDFLKYQ
TVDETNSSPSSGSDSSPNGADTIIGILDTGIWPESKSFNDKGMGPIPARWKGTCMDGHDF
GASKCNKKIVGARFYEEFDGRGTKMAGSARDENGHGTHVASTAAGSPVAGASYYGLAAGT
AKGGSPGSRIAVYRVCTSNGCRGSAIMKAFDDAIADGVDVLSLSLGSSPGFEELSKNPIA
IGAFHAVEKGIVVVCSAGNSGPDPKTVVNTAPWILTVAATTIDRDFETDIILGGNKLVKG
GGINFGNMTKSAVYPLIQGYSAKLNKRITEEEARGCVPDSLDKNKVKGKIVVCENLQNDG
FSPSDRLLEVKSRGGVGFILIDDDLRTVAPKFESFPAAAVSRKDGTEIISYIKSTRNPVA
SILPTVSTTKYKPAPVVPYFSSRGPAGNTPNLLKPDITAPGVTILAAWPGNKQPMFNILS
GTSMSCPHVSGIAATVKAQNPTWGPSTIKSAIMTTAIQTNNLKAPITTNFGSKATPYDIG
AGEASTSGPLKPGLVYATDVADYLHFLCSVGYDISKIKLISSTVPKDFSCPKHSSSELVS
NMNYPSIAISGLKKYKTKKVTRTVTNVGEEASVYIAIVEAPTGLRVQVIPSKLEFTNKNK
KLSYEVSFRASSTTKEDMFGSITWTNGKYKVRSPFVVSNSG

Transcript Sequence

Gene sequence data has not been registered.